SELECT 
  category_id, 
  parent_id 
FROM 
  cscart_categories 
WHERE 
  parent_id IN(
    2739, 2753, 2754, 2871, 3135, 3290, 920
  ) 
  AND category_id != 414

Query time 0.00043

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "11.21"
    },
    "table": {
      "table_name": "cscart_categories",
      "access_type": "range",
      "possible_keys": [
        "PRIMARY",
        "parent",
        "p_category_id"
      ],
      "key": "parent",
      "used_key_parts": [
        "parent_id"
      ],
      "key_length": "3",
      "rows_examined_per_scan": 21,
      "rows_produced_per_join": 21,
      "filtered": "100.00",
      "index_condition": "(`s2cart`.`cscart_categories`.`parent_id` in (2739,2753,2754,2871,3135,3290,920))",
      "cost_info": {
        "read_cost": "9.11",
        "eval_cost": "2.10",
        "prefix_cost": "11.21",
        "data_read_per_join": "74K"
      },
      "used_columns": [
        "category_id",
        "parent_id"
      ],
      "attached_condition": "(`s2cart`.`cscart_categories`.`category_id` <> 414)"
    }
  }
}

Result

category_id parent_id
2740 2739
2742 2739
2745 2739
2747 2739
2750 2739
2751 2739
2752 2739
2872 2871
2873 2871
2874 2871
2875 2871
2876 2871
2877 2871
3136 3135
3137 3135
3138 3135
3139 3135
3140 3135