SELECT 
  category_id, 
  parent_id 
FROM 
  cscart_categories 
WHERE 
  parent_id IN(
    2655, 2656, 2660, 2657, 2658, 2659, 2666, 
    2664, 2662, 2661, 2663, 2665, 2667, 
    2670, 2669, 2668
  ) 
  AND category_id != 414

Query time 0.00103

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "11.21"
    },
    "table": {
      "table_name": "cscart_categories",
      "access_type": "range",
      "possible_keys": [
        "PRIMARY",
        "parent",
        "p_category_id"
      ],
      "key": "parent",
      "used_key_parts": [
        "parent_id"
      ],
      "key_length": "3",
      "rows_examined_per_scan": 16,
      "rows_produced_per_join": 16,
      "filtered": "100.00",
      "index_condition": "(`s2cart`.`cscart_categories`.`parent_id` in (2655,2656,2660,2657,2658,2659,2666,2664,2662,2661,2663,2665,2667,2670,2669,2668))",
      "cost_info": {
        "read_cost": "9.61",
        "eval_cost": "1.60",
        "prefix_cost": "11.21",
        "data_read_per_join": "56K"
      },
      "used_columns": [
        "category_id",
        "parent_id"
      ],
      "attached_condition": "(`s2cart`.`cscart_categories`.`category_id` <> 414)"
    }
  }
}