SELECT 
  category_id, 
  parent_id 
FROM 
  cscart_categories 
WHERE 
  parent_id IN(
    899, 900, 901, 902, 903, 898, 907, 882, 
    905, 889, 904, 906, 910, 908, 909
  ) 
  AND category_id != 414

Query time 0.00021

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "10.51"
    },
    "table": {
      "table_name": "cscart_categories",
      "access_type": "range",
      "possible_keys": [
        "PRIMARY",
        "parent",
        "p_category_id"
      ],
      "key": "parent",
      "used_key_parts": [
        "parent_id"
      ],
      "key_length": "3",
      "rows_examined_per_scan": 15,
      "rows_produced_per_join": 15,
      "filtered": "100.00",
      "index_condition": "(`s2cart`.`cscart_categories`.`parent_id` in (899,900,901,902,903,898,907,882,905,889,904,906,910,908,909))",
      "cost_info": {
        "read_cost": "9.01",
        "eval_cost": "1.50",
        "prefix_cost": "10.51",
        "data_read_per_join": "53K"
      },
      "used_columns": [
        "category_id",
        "parent_id"
      ],
      "attached_condition": "(`s2cart`.`cscart_categories`.`category_id` <> 414)"
    }
  }
}